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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017650.1_50088_50781_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

50088 - 50781

Intron Length:

694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGTGGGG

5'SS Class:

major

3'SS Sequence:

TCTCGAAATGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCGAAAT

U12 Branch Point Sequence:

CCCTCTCGAAAT

Flanking Amino Acid:

LRVGMRREGARRNFPVPRLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.5

0.3

1.1

47.6

42.8

Major BPS

54.6

0.12

1.3

61.2

Major PPT

47.9

-0.1

1.7

51.9

40.9

Minor 5ss

21.8

-3.2

3.4

28.7

43.7

Minor BPS

44.9

-0.3

1.9

58.24

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003193

Chromosome:

PEDO01017650.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003242

41664 - 50822

9159