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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017650.1_5495_5604_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5495 - 5604

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCATCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAT

U12 Branch Point Sequence:

CATCGCCTAACC

Flanking Amino Acid:

NILRVEYFLQIYVSVPGSKK

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

67.4

0.43

1.2

38.9

Major PPT

76.3

0.59

0.8

69.6

31.1

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

48.2

-0.1

2.1

61.91

Associated Gene:

Gene:

TXNIP

Ensembl Gene ID:

ENSAPLG00000005479

Chromosome:

PEDO01017650.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005679

3939 - 7922

3984