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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017661.1_12148_14442_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12148 - 14442

Intron Length:

2295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTTTTATCT

Flanking Amino Acid:

LREESELTRRRLSRRRSSIK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.4

38.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.8

0.9

0.7

89.4

25.6

Minor 5ss

25.2

-2.9

3.2

43.6

Minor BPS

68.6

0.66

1.5

83.95

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002075

Chromosome:

PEDO01017661.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041732

11735 - 30257

18523

ENSAPLT00000002111

11808 - 30257

18450