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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017661.1_20805_21406_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20805 - 21406

Intron Length:

602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

ATCTCCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

ACAGTCTGAAAT

Flanking Amino Acid:

TRPDPKGDFVKKERQRLESL

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

76.1

32.7

Major BPS

71.6

0.54

33.1

Major PPT

83.9

0.76

0.8

30.2

Minor 5ss

38.6

-1.3

2.8

51.7

39.2

Minor BPS

48.3

-0

1.6

60.98

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002075

Chromosome:

PEDO01017661.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041732

11735 - 30257

18523