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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017661.1_36600_36683_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36600 - 36683

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCTTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TGCACCCTGACG

Flanking Amino Acid:

LKSRIQLCASDSQLAKCQAP

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

64.3

47.1

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

71.1

0.47

0.9

64.5

36.5

Minor 5ss

30.2

-2.3

3.2

38.6

46.5

Minor BPS

49.8

-0.1

1.8

57.32

43.9

Associated Gene:

Gene:

LRRC55

Ensembl Gene ID:

ENSAPLG00000017015

Chromosome:

PEDO01017661.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040093

35647 - 36955

1309