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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017724.1_1605_2348_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1605 - 2348

Intron Length:

744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CATGTTGCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

ATTTTACAAACT

Flanking Amino Acid:

LLCVVLGEPNVITHTEHVKV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

29.6

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

72.5

0.51

65.6

40.7

Minor 5ss

40.6

-1

2.7

47.5

42.3

Minor BPS

48.1

-0

2.2

76.01

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017285

Chromosome:

PEDO01017724.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036996

812 - 7406

6595