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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017727.1_2666_2928_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2666 - 2928

Intron Length:

263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGAAT

5'SS Class:

major

3'SS Sequence:

TCTCTTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

TAGTAATTAAGG

Flanking Amino Acid:

WRGHPVYDCQTDFRFFWLFS

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

72.2

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

88.1

0.86

0.6

87.5

22.8

Minor 5ss

32.2

-2

3.5

47.9

47.8

Minor BPS

-0.3

2.1

54.9

45.5

Associated Gene:

Gene:

SNUPN

Ensembl Gene ID:

ENSAPLG00000013251

Chromosome:

PEDO01017727.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024742

21 - 3237

3217

ENSAPLT00000013805

21 - 3237

3217