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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017727.1_871_1519_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

871 - 1519

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGCGGC

5'SS Class:

major

3'SS Sequence:

TGTTTCCTCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTGTTACTAGCT

Flanking Amino Acid:

RKLPKRYANQLMLSEWLIDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

59.3

40.2

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

82.5

0.73

0.8

77.3

31.4

Minor 5ss

37.3

-1.4

3.3

49.7

46.9

Minor BPS

47.7

-0

2.1

73.62

Associated Gene:

Gene:

SNUPN

Ensembl Gene ID:

ENSAPLG00000013251

Chromosome:

PEDO01017727.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013805

21 - 3237

3217

ENSAPLT00000024742

21 - 3237

3217