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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017729.1_2592_2993_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2592 - 2993

Intron Length:

402

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCGGGTGAA

5'SS Class:

major

3'SS Sequence:

TGTCCAGAACCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTTCTCATTT

Flanking Amino Acid:

LCMQMPNSSSVSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

62.4

39.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

57.1

0.16

1.1

48.7

43.2

Minor 5ss

-4

3.6

32.3

Minor BPS

62.3

0.47

1.8

83.64

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023640

Chromosome:

PEDO01017729.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024968

2583 - 3932

1350