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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017756.1_3815_4625_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3815 - 4625

Intron Length:

811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACAGAG

5'SS Class:

major

3'SS Sequence:

TCTGTGCAGGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ACCACTTTAATG

Flanking Amino Acid:

EKMTWLDKTMSHSPSEGLRK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.44

1.2

58.7

40.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

51.1

0.03

1.2

Minor 5ss

35.5

-1.7

3.4

43.6

45.1

Minor BPS

57.4

0.09

1.4

53.71

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017878

Chromosome:

PEDO01017756.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029156

3590 - 5171

1582