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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017756.1_534_660_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

534 - 660

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CCCATCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TGACCCAGAGCC

Flanking Amino Acid:

SEESSTAVPAAVVQGAPKEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

72.5

0.51

0.8

65.2

30.4

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

44.6

-0.4

1.9

56.46

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025261

Chromosome:

PEDO01017756.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030162

260 - 1766

1507