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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017773.1_2852_4424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2852 - 4424

Intron Length:

1573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCGG

5'SS Class:

strong_major

3'SS Sequence:

GTGTCCCCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TACCTCTCATCC

Flanking Amino Acid:

NRRYTKDRFTVALSPFTVTR

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

68.8

43.8

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

68.6

0.42

0.9

58.8

38.3

Minor 5ss

28.2

-2.5

2.7

32.3

42.2

Minor BPS

47.4

-0.2

1.8

56.95

41.4

Associated Gene:

Gene:

TLX1

Ensembl Gene ID:

ENSAPLG00000023698

Chromosome:

PEDO01017773.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048501

1057 - 4893

3837