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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017777.1_2500_4287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2500 - 4287

Intron Length:

1788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTATCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAA

U12 Branch Point Sequence:

CAACACTCAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

71.6

40.2

Major BPS

65.6

0.39

0.9

67.3

29.6

Major PPT

75.4

0.57

0.9

69.6

35.3

Minor 5ss

34.1

-1.8

2.8

34.5

Minor BPS

48.4

-0.1

1.8

55.91

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023223

Chromosome:

PEDO01017777.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040950

2405 - 6520

4116