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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017816.1_1140_1527_R

Intron Information:

Intron Rank:

133199

Intron Class:

major

Intron Phase:

Intron Coordinates:

1140 - 1527

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTTAG

5'SS Class:

major

3'SS Sequence:

TTTATTTATGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

GTTTATTTATGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.3

74.9

38.1

Major BPS

88.7

0.96

0.8

36.5

Major PPT

81.2

0.7

0.9

78.1

35.3

Minor 5ss

40.9

-1

2.8

48.5

41.2

Minor BPS

49.6

0.05

73.39

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018908

Chromosome:

PEDO01017816.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029527

69 - 3080

3012