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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017826.1_2253_2367_F

Intron Information:

Intron Rank:

133694

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2253 - 2367

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-CG

5'SS Sequence:

TGG|GTGGAGCTC

5'SS Class:

weak_major

3'SS Sequence:

GGTTCTCCTTGCG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAGTCAT

U12 Branch Point Sequence:

TCATCTTGGAGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.2

0.15

1.1

48.1

42.6

Major BPS

68.2

0.45

1.1

69.4

37.7

Major PPT

34.6

-0.8

3.4

58.7

Minor 5ss

27.4

-2.6

3.6

31.9

Minor BPS

46.9

-0.3

1.8

51.36

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021915

Chromosome:

PEDO01017826.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044599

21 - 3834

3814

ENSAPLT00000038963

21 - 4272

4252

ENSAPLT00000023123

1020 - 3834

2815