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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017826.1_2701_3207_F

Intron Information:

Intron Rank:

133697

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2701 - 3207

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTTCCTT

5'SS Class:

weak_major

3'SS Sequence:

GGACCTCTTTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

TCAACCTGGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.1

0.17

1.4

58.1

46.2

Major BPS

74.6

0.61

65.6

41.4

Major PPT

49.4

-0

1.7

58.1

42.9

Minor 5ss

45.4

-0.5

2.9

65.9

Minor BPS

55.4

0.25

1.5

69.31

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021915

Chromosome:

PEDO01017826.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038963

21 - 4272

4252