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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017851.1_3446_3540_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3446 - 3540

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCGGG

5'SS Class:

major

3'SS Sequence:

TTTGCCCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAG

U12 Branch Point Sequence:

GCAAGCTCAGCA

Flanking Amino Acid:

RTLYYAKDAKSLIFDEVDLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

47.1

Major BPS

48.8

-0

1.5

57.1

41.8

Major PPT

80.8

0.69

0.8

74.3

30.8

Minor 5ss

34.3

-1.8

3.6

46.4

Minor BPS

40.6

-0.7

46.25

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018329

Chromosome:

PEDO01017851.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017215

21 - 4135

4115