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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017852.1_279_386_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

279 - 386

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAC|GCACGGGAG

5'SS Class:

weak_major

3'SS Sequence:

GCTTTCCAACGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

GGCTTTCCAACG

Flanking Amino Acid:

PGEVYDVYCYLHSLAGKVFY

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

57.2

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

-0.1

1.7

52.2

41.9

Minor 5ss

18.6

-3.6

4.1

26.6

37.7

Minor BPS

43.5

-0.6

1.8

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019904

Chromosome:

PEDO01017852.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025030

6 - 1694

1689