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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017857.1_1266_1622_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1266 - 1622

Intron Length:

357

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCACACGGA

5'SS Class:

weak_major

3'SS Sequence:

CTCCTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTCAC

U12 Branch Point Sequence:

GCTGACTCACCC

Flanking Amino Acid:

SSSSSFSSPGGLLIPPPPLP

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.4

0.2

1.3

50.1

Major BPS

59.5

0.24

1.2

63.3

35.6

Major PPT

0.79

0.7

79.9

25.5

Minor 5ss

23.2

-3.1

4.2

43.5

Minor BPS

43.4

-0.5

52.11

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029058

Chromosome:

PEDO01017857.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047553

1151 - 6865

5715