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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017857.1_25687_25849_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25687 - 25849

Intron Length:

163

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTT|GCGAGCTGG

5'SS Class:

weak_major

3'SS Sequence:

GTTCTTCGAGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCCTAC

U12 Branch Point Sequence:

GGTTCTTCGAGG

Flanking Amino Acid:

TRGEENFGGVPGRCSLFWYG

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.2

0.08

1.4

44.2

43.3

Major BPS

48.6

-0

1.2

47.8

37.3

Major PPT

49.2

-0

1.7

58.9

41.8

Minor 5ss

-2.3

43.3

45.3

Minor BPS

46.6

-0.4

1.9

52.15

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021422

Chromosome:

PEDO01017857.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042061

24223 - 26008

1786