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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017857.1_27322_27457_R

Intron Information:

Intron Rank:

138629

Intron Class:

major

Intron Phase:

Intron Coordinates:

27322 - 27457

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGAGAC

U12 Branch Point Sequence:

TGTTTCTCCCCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.5

33.5

Major BPS

45.6

-0.2

1.2

38.1

41.7

Major PPT

78.4

0.64

0.8

70.1

36.5

Minor 5ss

-1

56.7

47.6

Minor BPS

38.3

-0.9

3.6

62.67

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022084

Chromosome:

PEDO01017857.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038261

27123 - 29336

2214