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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017857.1_32664_32776_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

32664 - 32776

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGCGTGGG

5'SS Class:

weak_major

3'SS Sequence:

CCTCCTGCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGCAG

U12 Branch Point Sequence:

CAGCCCTGCAGC

Flanking Amino Acid:

AFAGLPHLQYLFIENNDIQA

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.19

1.2

47.6

42.9

Major BPS

40.6

-0.5

1.6

48.7

45.1

Major PPT

65.5

0.35

0.8

57.3

33.3

Minor 5ss

28.5

-2.5

3.3

40.2

45.9

Minor BPS

41.1

-0.7

2.1

45.59

42.7

Associated Gene:

Gene:

LGI3

Ensembl Gene ID:

ENSAPLG00000014758

Chromosome:

PEDO01017857.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015374

31610 - 34485

2876