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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017857.1_54364_54635_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54364 - 54635

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGTG

5'SS Class:

strong_major

3'SS Sequence:

AAAATAATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

CCCCCCAAAAAT

Flanking Amino Acid:

HYLNVHRPVQKLLQLSGHPL

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

72.2

39.5

Major BPS

71.2

0.53

70.3

31.9

Major PPT

62.9

0.29

1.1

56.9

46.6

Minor 5ss

34.5

-1.8

3.4

45.9

49.3

Minor BPS

42.9

-0.4

55.16

46.3

Associated Gene:

Gene:

FAM160B2

Ensembl Gene ID:

ENSAPLG00000025639

Chromosome:

PEDO01017857.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030821

50919 - 57282

6364