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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017857.1_54741_55060_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54741 - 55060

Intron Length:

320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGGC

5'SS Class:

major

3'SS Sequence:

CTTTCCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

GGGGGCTGACCC

Flanking Amino Acid:

ETLSTLGKAEYPPGMRQQVL

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

65.2

40.3

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

88.5

0.87

0.7

80.6

31.4

Minor 5ss

29.4

-2.4

3.5

41.3

45.4

Minor BPS

39.8

-0.7

2.1

44.37

43.4

Associated Gene:

Gene:

FAM160B2

Ensembl Gene ID:

ENSAPLG00000025639

Chromosome:

PEDO01017857.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030821

50919 - 57282

6364