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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017876.1_2866_3574_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2866 - 3574

Intron Length:

709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCACAT

U12 Branch Point Sequence:

AAGCAGTGGACC

Flanking Amino Acid:

NKAKLKVFVDGCFFLVTSTM

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

82.3

25.5

Major BPS

52.8

0.07

1.1

60.5

36.2

Major PPT

76.7

0.6

0.8

30.9

Minor 5ss

41.9

-0.9

2.8

53.7

43.8

Minor BPS

38.5

-0.9

2.1

44.24

36.9

Associated Gene:

Gene:

TSPAN6

Ensembl Gene ID:

ENSAPLG00000008734

Chromosome:

PEDO01017876.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009106

21 - 5621

5601