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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017876.1_3659_5537_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3659 - 5537

Intron Length:

1879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAGCAT

U12 Branch Point Sequence:

TTTTTTTTTCCA

Flanking Amino Acid:

GISFGIACFQLVGIILACCL

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

78.6

35.9

Major BPS

50.9

0.02

1.5

63.4

42.8

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

38.1

-1.3

3.1

52.9

44.3

Minor BPS

44.4

-0.4

3.6

74.12

37.8

Associated Gene:

Gene:

TSPAN6

Ensembl Gene ID:

ENSAPLG00000008734

Chromosome:

PEDO01017876.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009106

21 - 5621

5601