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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017876.1_916_1049_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

916 - 1049

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGAGCC

5'SS Class:

major

3'SS Sequence:

CCTCTTTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAG

U12 Branch Point Sequence:

CCGACCTCAGCG

Flanking Amino Acid:

VLLTYTFVFWVSGIVLLAVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

Major BPS

49.8

-0

1.5

59.3

39.1

Major PPT

75.5

0.57

0.7

68.8

31.7

Minor 5ss

25.8

-2.8

3.1

25.9

36.5

Minor BPS

44.6

-0.5

1.9

44.09

47.4

Associated Gene:

Gene:

TSPAN6

Ensembl Gene ID:

ENSAPLG00000008734

Chromosome:

PEDO01017876.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009106

21 - 5621

5601