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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017892.1_13474_13804_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13474 - 13804

Intron Length:

331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACGG

5'SS Class:

major

3'SS Sequence:

TCTCTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

CCGGGCTCAGCT

Flanking Amino Acid:

QEYDAVVIGAGHNGLVAAAY

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.2

57.3

47.4

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

86.2

0.81

0.7

80.7

24.5

Minor 5ss

36.9

-1.5

3.1

48.4

47.1

Minor BPS

40.1

-0.6

2.1

51.2

Associated Gene:

Gene:

PYROXD2

Ensembl Gene ID:

ENSAPLG00000011751

Chromosome:

PEDO01017892.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032761

10911 - 14546

3636

ENSAPLT00000012257

9950 - 14546

4597