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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017924.1_10533_11077_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10533 - 11077

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

GATCCTTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

GATCCTTTCACA

Flanking Amino Acid:

YAISDFSVGGRCKCNGHASE

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

38.2

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

74.8

0.56

0.9

68.2

37.2

Minor 5ss

25.5

-2.8

3.5

37.8

47.1

Minor BPS

0.21

1.8

66.86

39.2

Associated Gene:

Gene:

LAMC3

Ensembl Gene ID:

ENSAPLG00000012934

Chromosome:

PEDO01017924.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026534

419 - 16042

15624

ENSAPLT00000026382

419 - 16042

15624

ENSAPLT00000013501

21 - 16042

16022