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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017924.1_1061_1143_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1061 - 1143

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGAGCA

5'SS Class:

major

3'SS Sequence:

CGTCCCTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CTGTCCCCATCT

Flanking Amino Acid:

AEQVAGESTKRAQAVLRGSK

Intron Amino Acid Position:

1413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.3

61.4

37.5

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

79.2

0.66

0.8

72.5

32.1

Minor 5ss

32.2

-2

3.1

39.9

45.6

Minor BPS

-0.1

2.1

68.87

47.5

Associated Gene:

Gene:

LAMC3

Ensembl Gene ID:

ENSAPLG00000012934

Chromosome:

PEDO01017924.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026534

419 - 16042

15624

ENSAPLT00000026382

419 - 16042

15624

ENSAPLT00000013501

21 - 16042

16022