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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017924.1_11209_11377_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11209 - 11377

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCTTGGG

5'SS Class:

major

3'SS Sequence:

GTGTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAA

U12 Branch Point Sequence:

CTCTCCAAGATG

Flanking Amino Acid:

YNFDGSPALQEWVTVTDLLI

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

56.2

Major BPS

55.5

0.14

1.3

66.7

39.7

Major PPT

73.9

0.54

0.9

66.6

35.6

Minor 5ss

25.6

-2.8

3.1

32.1

42.3

Minor BPS

-0.5

50.71

44.3

Associated Gene:

Gene:

LAMC3

Ensembl Gene ID:

ENSAPLG00000012934

Chromosome:

PEDO01017924.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026534

419 - 16042

15624

ENSAPLT00000026382

419 - 16042

15624

ENSAPLT00000013501

21 - 16042

16022