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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017924.1_1940_2063_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1940 - 2063

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

CACCTCGCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

GACCTGTCACCT

Flanking Amino Acid:

KLLQAAAPGQALMAQVGALV

Intron Amino Acid Position:

1258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

60.6

0.24

54.7

34.8

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

38.2

-0.8

2.2

Associated Gene:

Gene:

LAMC3

Ensembl Gene ID:

ENSAPLG00000012934

Chromosome:

PEDO01017924.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026382

419 - 16042

15624