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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017924.1_4672_4770_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4672 - 4770

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

CCACCTTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

CTCCCACTAATT

Flanking Amino Acid:

VCTHCPPGQRGKRCELCDDG

Intron Amino Acid Position:

783

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

76.9

0.67

66.3

40.4

Major PPT

65.4

0.35

0.8

57.5

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

48.2

-0

67.26

43.5

Associated Gene:

Gene:

LAMC3

Ensembl Gene ID:

ENSAPLG00000012934

Chromosome:

PEDO01017924.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013501

21 - 16042

16022

ENSAPLT00000026534

419 - 16042

15624

ENSAPLT00000026382

419 - 16042

15624