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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017924.1_4960_6210_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4960 - 6210

Intron Length:

1251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGCACC

5'SS Class:

major

3'SS Sequence:

TTCCTCCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACCCAC

U12 Branch Point Sequence:

CCCTCCAGCACC

Flanking Amino Acid:

NQHGDCEPRSGQCRCLHNTE

Intron Amino Acid Position:

720

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

67.5

37.7

Major BPS

46.9

-0.1

1.1

53.7

32.6

Major PPT

81.5

0.71

0.7

76.6

25.4

Minor 5ss

41.3

-1

2.7

52.3

44.6

Minor BPS

43.4

-0.5

2.1

51.55

45.4

Associated Gene:

Gene:

LAMC3

Ensembl Gene ID:

ENSAPLG00000012934

Chromosome:

PEDO01017924.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013501

21 - 16042

16022

ENSAPLT00000026534

419 - 16042

15624

ENSAPLT00000026382

419 - 16042

15624