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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017928.1_80_488_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

80 - 488

Intron Length:

409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGATG

5'SS Class:

strong_major

3'SS Sequence:

GGAGGCACTGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACAAGAT

U12 Branch Point Sequence:

TGATGGAGGACA

Flanking Amino Acid:

YREAPNKGTKAQEEIKRAME

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.6

37.3

Major BPS

48.4

-0.1

1.1

37.8

Major PPT

47.3

-0.1

1.1

Minor 5ss

30.4

-2.2

3.2

38.7

46.6

Minor BPS

36.1

-1.1

2.5

49.71

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019749

Chromosome:

PEDO01017928.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037422

2 - 1624

1623