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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017934.1_4640_6283_F

Intron Information:

Intron Rank:

138479

Intron Class:

major

Intron Phase:

Intron Coordinates:

4640 - 6283

Intron Length:

1644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGCC

5'SS Class:

major

3'SS Sequence:

CATGTTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTCCTGCAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

68.8

Major BPS

100

1.24

0.5

100

Major PPT

74.7

0.56

0.8

73.1

36.9

Minor 5ss

-1.6

3.6

50.9

45.8

Minor BPS

47.5

-0.1

2.1

70.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024564

Chromosome:

PEDO01017934.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048206

4008 - 6697

2690