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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017990.1_1135_1692_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1135 - 1692

Intron Length:

558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCCGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTAAC

U12 Branch Point Sequence:

TCGGCGGTAACC

Flanking Amino Acid:

QKSAQTFLSERVLGPLLCSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

48.8

-0

1.3

50.7

41.5

Major PPT

72.1

0.5

40.8

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

43.4

-0.5

2.6

57.14

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024559

Chromosome:

PEDO01017990.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038145

900 - 1755

856