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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018008.1_5652_5762_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5652 - 5762

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGTCCC

5'SS Class:

major

3'SS Sequence:

CTCCTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAG

U12 Branch Point Sequence:

CCGGCCTCAGCT

Flanking Amino Acid:

TLTSQAYTLMEYSDGMAFCT

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

62.6

42.1

Major BPS

45.4

-0.2

1.8

59.3

47.1

Major PPT

74.6

0.55

0.7

68.3

25.5

Minor 5ss

34.6

-1.8

3.1

42.3

39.5

Minor BPS

46.7

-0.1

1.9

59.53

49.5

Associated Gene:

Gene:

CTSE

Ensembl Gene ID:

ENSAPLG00000013437

Chromosome:

PEDO01018008.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014010

5221 - 9590

4370