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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018008.1_6371_6467_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6371 - 6467

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

CCTCCTCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

AGCTCCTCACCC

Flanking Amino Acid:

QQGYWQIQLDNVQVGGTVAF

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

40.1

Major BPS

72.4

0.56

73.5

32.5

Major PPT

79.1

0.65

0.7

72.8

25.4

Minor 5ss

28.4

-2.5

3.1

31.4

36.6

Minor BPS

51.4

0.02

1.9

61.85

43.3

Associated Gene:

Gene:

CTSE

Ensembl Gene ID:

ENSAPLG00000013437

Chromosome:

PEDO01018008.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014010

5221 - 9590

4370