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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018008.1_6591_6823_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6591 - 6823

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTAAGGGCA

5'SS Class:

major

3'SS Sequence:

CTCCTGCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGAAAT

U12 Branch Point Sequence:

AATCCCTCACGT

Flanking Amino Acid:

ELPMFSVYMSSNPDSSLGGE

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.6

0.35

1.3

59.4

39.7

Major BPS

50.6

0.02

1.1

36.4

Major PPT

70.3

0.46

0.8

61.1

35.1

Minor 5ss

-2.2

3.5

39.4

40.7

Minor BPS

46.4

-0.1

2.1

65.61

44.4

Associated Gene:

Gene:

CTSE

Ensembl Gene ID:

ENSAPLG00000013437

Chromosome:

PEDO01018008.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014010

5221 - 9590

4370