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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018008.1_9137_9531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9137 - 9531

Intron Length:

395

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCGCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACCCAA

U12 Branch Point Sequence:

TCCCCAGTGACG

Flanking Amino Acid:

LCLALGSGLKRVTLTRHRSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

55.3

0.13

1.2

64.7

33.6

Major PPT

70.5

0.46

0.8

61.4

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

42.8

-0.7

2.3

44.8

Associated Gene:

Gene:

CTSE

Ensembl Gene ID:

ENSAPLG00000013437

Chromosome:

PEDO01018008.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014010

5221 - 9590

4370