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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018021.1_127_1483_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

127 - 1483

Intron Length:

1357

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCACTCGCT

5'SS Class:

weak_major

3'SS Sequence:

TGTGCTGGAGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCAGAG

U12 Branch Point Sequence:

TTGTGCTGGAGA

Flanking Amino Acid:

AEKWQFCFGNCSPGFCGAGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.2

0.22

1.3

60.6

42.5

Major BPS

44.1

-0.3

1.5

40.4

42.3

Major PPT

49.2

-0

1.2

49.5

Minor 5ss

27.8

-2.5

4.4

Minor BPS

46.5

-0.2

2.2

62.7

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028110

Chromosome:

PEDO01018021.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019175

89 - 2980

2892