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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018027.1_2572_3092_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2572 - 3092

Intron Length:
521

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTACGGGGG

5'SS Class:
major

3'SS Sequence:
TCTGCACCCCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTGAC

U12 Branch Point Sequence:
TGGTCCTGACAC

Flanking Amino Acid:
AERAHRDALPTPESTHSAPT

Intron Amino Acid Position:
134

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.1
0.4
1.1
52.6
44.7

Major BPS
68.9
0.47
1
59.2
39.1

Major PPT
68.9
0.43
0.9
58.9
37.3

Minor 5ss
29.3
-2.4
3.7
36.9
42.1

Minor BPS
49.2
-0
1.9
61.53
43.2

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01018027.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

370 - 4146
3777

370 - 4146
3777