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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018048.1_1539_2488_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1539 - 2488

Intron Length:

950

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACA|GCATGAGGA

5'SS Class:

weak_major

3'SS Sequence:

TTACTCTGCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAC

U12 Branch Point Sequence:

TTACTCTGCACA

Flanking Amino Acid:

VPPAVNPLIYTALPTPRQWI

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.4

0.1

1.4

51.4

42.5

Major BPS

66.4

0.41

37.6

Major PPT

0.52

0.9

68.4

37.2

Minor 5ss

27.8

-2.6

4.2

42.8

45.4

Minor BPS

49.4

-0

1.9

66.44

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026493

Chromosome:

PEDO01018048.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023907

444 - 2655

2212