Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018090.1_620_1413_R

Intron Information:

Intron Rank:

148445

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

620 - 1413

Intron Length:

794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGATGC

5'SS Class:

major

3'SS Sequence:

ATGCAGCAGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

AAAAAATTACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

61.6

38.1

Major BPS

73.9

0.59

30.2

Major PPT

50.2

0.01

1.1

41.8

Minor 5ss

40.9

-1

3.1

56.8

Minor BPS

40.3

-0.6

1.9

53.59

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027241

Chromosome:

PEDO01018090.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026425

517 - 2617

2101