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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018103.1_1049_1142_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1049 - 1142

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGGCTC

5'SS Class:

major

3'SS Sequence:

TCCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

TACCCCTCAAAC

Flanking Amino Acid:

KRYACTSHTQGLSPGCYDTY

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.3

59.9

44.9

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

74.6

0.55

0.7

24.8

Minor 5ss

30.3

-2.3

3.5

41.7

45.1

Minor BPS

54.5

0.12

1.7

63.2

41.5

Associated Gene:

Gene:

LOXL1

Ensembl Gene ID:

ENSAPLG00000015260

Chromosome:

PEDO01018103.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015899

346 - 1556

1211