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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018103.1_1239_1341_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1239 - 1341

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATGCTT

5'SS Class:

major

3'SS Sequence:

TGTTTTCGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TTTTGCTCATTT

Flanking Amino Acid:

DVQPGNYVLKVQVNPKYIVL

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

71.4

39.9

Major BPS

79.7

0.74

79.6

35.6

Major PPT

0.54

0.9

73.8

36.9

Minor 5ss

31.3

-2.1

3.5

47.3

48.1

Minor BPS

52.3

0.15

2.2

79.99

42.5

Associated Gene:

Gene:

LOXL1

Ensembl Gene ID:

ENSAPLG00000015260

Chromosome:

PEDO01018103.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015899

346 - 1556

1211