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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018103.1_576_891_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

576 - 891

Intron Length:

316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTTGG

5'SS Class:

major

3'SS Sequence:

CCCCCACCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

ACCCCCCCACCC

Flanking Amino Acid:

RHSWEWHSCHQHYHSMDEFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

59.8

41.8

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

64.1

0.32

0.8

53.8

29.8

Minor 5ss

36.3

-1.5

2.9

45.8

43.4

Minor BPS

40.8

-0.7

47.13

41.9

Associated Gene:

Gene:

LOXL1

Ensembl Gene ID:

ENSAPLG00000015260

Chromosome:

PEDO01018103.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015899

346 - 1556

1211