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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018179.1_11133_11417_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11133 - 11417

Intron Length:

285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGCCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CCATTCTCACCC

Flanking Amino Acid:

SFCGYHPKNNKYFGFITKHP

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

80.7

33.7

Major BPS

0.87

0.8

85.6

Major PPT

76.1

0.59

0.8

73.2

31.8

Minor 5ss

33.7

-1.9

2.8

42.7

38.3

Minor BPS

47.4

-0.2

1.8

54.44

43.8

Associated Gene:

Gene:

MAPK8IP1

Ensembl Gene ID:

ENSAPLG00000020964

Chromosome:

PEDO01018179.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038249

10582 - 19352

8771

ENSAPLT00000028889

9915 - 19352

9438