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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018179.1_12403_12591_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12403 - 12591

Intron Length:

189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTCG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCAGAG

U12 Branch Point Sequence:

CGATCCCCACCA

Flanking Amino Acid:

EVTKDPDHITALAKNSDWVD

Intron Amino Acid Position:

565

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

65.7

40.6

Major BPS

46.6

-0.2

1.4

46.4

38.9

Major PPT

81.4

0.71

0.8

72.6

37.7

Minor 5ss

43.1

-0.8

56.2

48.2

Minor BPS

43.7

-0.4

2.1

54.21

43.8

Associated Gene:

Gene:

MAPK8IP1

Ensembl Gene ID:

ENSAPLG00000020964

Chromosome:

PEDO01018179.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038249

10582 - 19352

8771

ENSAPLT00000028889

9915 - 19352

9438